PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0001s0312.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 274aa    MW: 31367.5 Da    PI: 10.1108
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0001s0312.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.92e-112196270
             trihelix  2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                         W   ev +Li+a++  +er +++       +  + +W+++ ++m+++ ++r +  Ck++w+    +yk +k+++ k
  Mapoly0001s0312.2.p 21 WEPWEVYLLIQAKKVEWERHEANptrdrysENSALRWKKIEEFMKSQHVNRDSSACKNRWDATVAEYKLVKDWDVK 96
                         9999**********9999999753333333699****************************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.3E-819102No hitNo description
PROSITE profilePS500906.6793384IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MEMNISPGPG LRLGRKRSKN WEPWEVYLLI QAKKVEWERH EANPTRDRYS ENSALRWKKI  60
EEFMKSQHVN RDSSACKNRW DATVAEYKLV KDWDVKPGNR SFQSLSPQER KQASLPSYFD  120
IKSRELLDSF LGGRAYKAPP HSLPFLIGAE VDEKETTQAG ETSAAKTKYD QGFTKGEDMN  180
QGSSGKKRRK ASQGLAGVMA AFQDLSSRIM RIERENSGRA KEAHEMAKDA HALEKRKFEF  240
QLRKIEREDE RADKFVGVLG QIAEAFHKVA EKM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184190GKKRRKA
2185189KKRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.15e-11Trihelix family protein